Choosing the Right Oligonucleotide Synthesizer for Your Lab
Harold Devoz
Introduction
Not all oligonucleotide synthesizers are created equal. Selecting the right system depends on throughput, oligo complexity, scale, and future growth plans.
Key Questions to Ask Before Buying
- How many oligos do you need per run and per week?
- What quantities and lengths are required?
- Do you need DNA, RNA, LNA, or modified oligos?
- Are fast turnaround times critical?
- Do you need plate-based or column-based synthesis?
Column-Based vs Plate-Based Systems
Column-Based Synthesizers
- Ideal for custom, longer, or modified oligos
- Higher synthesis scales
- Greater flexibility
Plate-Based Synthesizers
- Best for high-throughput screening
- Lower synthesis scales
- Faster batch processing
Scaling for the Future
Choosing a system that meets today’s needs and tomorrow’s growth prevents costly upgrades later. Factors like amidite positions, reagent capacity, and monitoring features should be evaluated carefully.
👉 Next up: What your lab actually needs — from space and ventilation to safety and compliance.
